SelectSim/DESCRIPTION at main · CSOgroup/SelectSim · GitHub

1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
Package: SelectSim
Title: Selected Events Linked by Evolutionary Conditions across human Tumors
Version: 0.0.1.5
Authors@R:
    c(person("Arvind", "Iyer", , "ayalurarvind@gamil.com", role = c("aut", "cre"),comment = c(ORCID = "0000-0002-8247-700X")),
    person("Marco", "Mina", , "marco.mina.85@gmail.com", role = c("aut")),
    person("Miljan", "Petrovic", , "miljanpet93@gmail.com", role = c("aut")),
    person("Giovanni", "Ciriello", , "givoanni.cirello@unil.ch", role = c("aut"),comment = c(ORCID ="0000-0003-2021-8683")))
Description: This R package implements the SelectSim methodology to infer co-mutations between functional alterations in cancer.
License: MIT + file LICENSE
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2
Imports:
    doParallel,
    doRNG,
    dplyr,
    foreach,
    ggplot2,
    ggpubr,
    ggridges,
    Matrix,
    Rcpp,
    reshape2,
    Rfast,
    tictoc
Suggests:
    knitr,
    rmarkdown,
    testthat (>= 3.0.0)
Config/testthat/edition: 3
Depends:
    R (>= 3.5)
LazyData: true
VignetteBuilder: knitr
URL: https://csogroup.github.io/SelectSim/
LinkingTo:
    Rcpp,
    RcppArmadillo