example hadam4 extraction

Author: snsparrow

examples/extract_local_hadam4.sh

@@ -0,0 +1,28 @@
+# Script to extract data from BATCH to a directory on the server where the data is stored
+# Example paths are given for the GPFS filesystem on cpdn-ppc01 (data for upload2 in Oxford)
+# Author: Sihan Li
+# Modified: 08/09/2017
+#
+
+# Set up paths
+EXTRACT_SCRIPTS_DIR=..
+EXTRACT_DATA_DIR=/gws/nopw/j04/docile/scratch/ssparrow/
+
+# Current URL for uploads includes project and batch number
+BATCH=d196
+PROJECT=docile
+DATA_DIR=/gws/nopw/j04/docile/project_results/$PROJECT
+BATCH_DATA_DIR=$DATA_DIR/batch_${BATCH}/successful/
+# Specify a certain year to extract, if extract all years, set to 0
+YEAR=2011
+
+
+# Start and end zip to extract data from:
+START_ZIP=3
+END_ZIP=5
+
+# Extract data from the batch directory ['ga.pd',5216,[],'all',-0.0001,1,24,'mean','z0'],\
+/home/users/ssparrow01/miniconda2/envs/pyenv/bin/python $EXTRACT_SCRIPTS_DIR/wah_extract_local_hadam4.py -i $BATCH_DATA_DIR \
+-f "\
+['ga.pc',15201,[],'all',-200,200,6,'mean','pressure_0'],\
+"  -o $EXTRACT_DATA_DIR/batch_${BATCH} -y $YEAR -s $START_ZIP -e $END_ZIP