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Merge pull request #47 from BrainhackWestern/2025
updated schedule, removed datalad, extended anat
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config.yaml

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@@ -288,21 +288,21 @@ schedule:
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room: WIRB 4190 (Lunchroom)
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color: '#222233'
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priority: 1
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- tutorial: dataman
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time: '13:00'
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duration: '1:00'
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color: '#007c62'
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priority: 2
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room: WIRB 3000
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# - tutorial: dataman
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# time: '13:00'
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# duration: '1:00'
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# color: '#007c62'
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# priority: 2
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# room: WIRB 3000
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- tutorial: dti-mri
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time: '14:00'
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duration: '1:00'
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color: '#1f331e'
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priority: 2
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room: WIRB 3000
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room: WIRB 4190 (Lunchroom)
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- tutorial: anat
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time: '14:00'
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duration: '1:00'
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time: '13:00'
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duration: '2:00'
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color: '#1f331e'
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priority: 3
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room: WIRB 3000
@@ -351,7 +351,22 @@ tutorials:
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- Alaa Taha
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- Violet Liu
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image: '/img/afids.png'
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description: TBA
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description: |
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In this tutorial, we will begin with a basic introduction to neuroanatomy
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then briefly discuss the hippocampus, basal ganglia structures, midbrain,
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and relatively uncharted zona incerta. Taking on a clinical lens, we will
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explore how these structures could be crucial targets during functional
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neurosurgical procedures.
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We end our tutorial with 3 mini-software demo stations:
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1. Learning neuroanatomy using an open and validated anatomical fiducial
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framework ([AFIDs](https://validator.afids.io/))
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2. Reviewing introduced anatomy in the context of a surgical case using a
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virtual reality headset
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3. Applying our functional neuroanatomy knowledge to plan a surgical case
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using a fully open-source software
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([trajectoryGuide](https://trajectoryguide.greydongilmore.com/)).
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- id: tms
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name: 'Introduction to TMS'
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organizer:
@@ -374,17 +389,17 @@ tutorials:
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This tutorial will cover best practices for managing research code with
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the ultimate goal of sharing it. Aspects of Git and GitHub, including
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version control, branching, collaborations, etc. will be covered.
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- id: dataman
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name: 'Open Science: Research Data Management (DataLad)'
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image: /img/datalad.png
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organizer: Ali Tafakkor
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description: |
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Handling data can be a challenge, and it's best to think about it before
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you need to organize it on a deadline. In this tutorial you'll learn best
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practices for collecting, storing, processing, and sharing your data.
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We'll go over writing a Data Management Plan, formatting your data with
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BIDS and other open standards, and version controlling your data with
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DataLad, and uploading to a public repository.
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# - id: dataman
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# name: 'Open Science: Research Data Management (DataLad)'
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# image: /img/datalad.png
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# organizer: Ali Tafakkor
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# description: |
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# Handling data can be a challenge, and it's best to think about it before
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# you need to organize it on a deadline. In this tutorial you'll learn best
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# practices for collecting, storing, processing, and sharing your data.
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# We'll go over writing a Data Management Plan, formatting your data with
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# BIDS and other open standards, and version controlling your data with
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# DataLad, and uploading to a public repository.
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- id: reprod
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name: 'Open Science: Reproducible Data Analysis (Snakemake)'
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image: /img/snakemake_reproducable.png

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