NAMESPACE

# Generated by roxygen2: do not edit by hand

export(CoNGAfy)
export(annotateDB)
export(maTrex)
export(quietTCRgenes)
export(runTrex)
importFrom(Matrix,colSums)
importFrom(Matrix,sparse.model.matrix)
importFrom(SeuratObject,CreateAssayObject)
importFrom(SeuratObject,CreateDimReducObject)
importFrom(SeuratObject,CreateSeuratObject)
importFrom(SeuratObject,DefaultAssay)
importFrom(SeuratObject,VariableFeatures)
importFrom(SingleCellExperiment,"reducedDim<-")
importFrom(SingleCellExperiment,SingleCellExperiment)
importFrom(SingleCellExperiment,colData)
importFrom(SingleCellExperiment,reducedDim)
importFrom(SummarizedExperiment,"assay<-")
importFrom(SummarizedExperiment,"colData<-")
importFrom(SummarizedExperiment,assay)
importFrom(keras,load_model_hdf5)
importFrom(matrixStats,colWeightedMeans)
importFrom(reticulate,array_reshape)
importFrom(rlang,"%||%")
importFrom(stats,as.formula)
importFrom(stringdist,stringdist)
importFrom(stringr,str_sort)
importFrom(stringr,str_split)
importFrom(tensorflow,tf)
importFrom(utils,getFromNamespace)