SCAR/NAMESPACE at main · Bankso/SCAR · GitHub

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# Generated by roxygen2: do not edit by hand

export(SCAR_maker)
export(add_bams)
export(add_beds)
export(add_bgs)
export(add_cov)
export(add_matrix)
export(add_ovbed)
export(annotate_peaks)
export(bowtie2_align)
export(bowtie2_index)
export(call_peaks_SEACR)
export(call_peaks_macs)
export(compare_bws)
export(fastqc)
export(make_bgs)
export(make_matrix)
export(make_tracks)
export(make_tracks_opts)
export(pf_analysis)
export(plot_heatmap)
export(plot_profile)
export(print_message)
export(pull_setting)
export(set_settings)
exportClasses(SCAR_obj)
import(data.table)
import(methods)
import(stringr)
importFrom(ChIPseeker,annotatePeak)
importFrom(GenomicFeatures,makeTxDbFromGFF)
importFrom(data.table,data.table)
importFrom(purrr,imap)
importFrom(purrr,iwalk)
importFrom(purrr,map)
importFrom(purrr,pwalk)
importFrom(purrr,walk)
importFrom(rtracklayer,import)