From a0f5a5641728591873b397fd7d2523619d768036 Mon Sep 17 00:00:00 2001
From: victor5lm <victor_lopez_5@hotmail.com>
Date: Mon, 22 Jun 2026 15:17:37 +0200
Subject: [PATCH 1/4] Updated kaiju conf for taxprofiler

---
 buisciii/templates/taxprofiler/DOC/taxprofiler.config | 7 ++++---
 1 file changed, 4 insertions(+), 3 deletions(-)

diff --git a/buisciii/templates/taxprofiler/DOC/taxprofiler.config b/buisciii/templates/taxprofiler/DOC/taxprofiler.config
index 6c835bda3..56586286e 100644
--- a/buisciii/templates/taxprofiler/DOC/taxprofiler.config
+++ b/buisciii/templates/taxprofiler/DOC/taxprofiler.config
@@ -18,9 +18,10 @@ process {
 
     withName:'KAIJU_KAIJU' {
         errorStrategy = { task.exitStatus in [143,137,21,1] ? 'retry' : 'finish' }
-        maxRetries    = 3
-        memory = { 72.GB * task.attempt }
-        time = { 8.h }
+        maxRetries    = 4
+        cpus          = 32
+        memory        = { [216.GB, 224.GB, 240.GB, 256.GB][task.attempt - 1] }
+        time          = { 8.h * task.attempt }
     }
 }
 

From cb16a84562fc7269f62a3f26eb03128161798c4d Mon Sep 17 00:00:00 2001
From: victor5lm <victor_lopez_5@hotmail.com>
Date: Mon, 22 Jun 2026 15:17:47 +0200
Subject: [PATCH 2/4] Updated version in pyproject.toml

---
 pyproject.toml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/pyproject.toml b/pyproject.toml
index 65bbf9344..4e5672740 100755
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -4,7 +4,7 @@ build-backend = "setuptools.build_meta"
 
 [project]
 name = "buisciii-tools"
-version = "2.3.2"
+version = "2.3.3"
 dynamic = ["dependencies"]
 
 authors = [

From 11e6dceac11430197a04854102083d0016d019c8 Mon Sep 17 00:00:00 2001
From: victor5lm <victor_lopez_5@hotmail.com>
Date: Mon, 22 Jun 2026 15:17:53 +0200
Subject: [PATCH 3/4] Updated version in main

---
 buisciii/__main__.py | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/buisciii/__main__.py b/buisciii/__main__.py
index 395a0ea79..490de2b93 100755
--- a/buisciii/__main__.py
+++ b/buisciii/__main__.py
@@ -66,7 +66,7 @@ def run_buisciii():
         highlight=False,
     )
 
-    __version__ = "2.3.2"
+    __version__ = "2.3.3"
     stderr.print(
         "[grey39]    BUISCIII-tools version {}".format(__version__), highlight=False
     )

From f8824c95c7046282dc200c0af1879ab5c0c4db9e Mon Sep 17 00:00:00 2001
From: victor5lm <victor_lopez_5@hotmail.com>
Date: Mon, 22 Jun 2026 15:21:07 +0200
Subject: [PATCH 4/4] Updated CHANGELOG.md

---
 CHANGELOG.md | 3 ++-
 1 file changed, 2 insertions(+), 1 deletion(-)

diff --git a/CHANGELOG.md b/CHANGELOG.md
index 92948c1f8..cf26f603e 100755
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -4,7 +4,7 @@ All notable changes to this project will be documented in this file.
 
 The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/), and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).
 
-## [2.3.3dev] - 2026-XX-XX : https://github.com/BU-ISCIII/buisciii-tools/releases/tag/2.3.3dev
+## [2.3.3] - 2026-06-22 : https://github.com/BU-ISCIII/buisciii-tools/releases/tag/2.3.3
 
 ### Credits
 
@@ -40,6 +40,7 @@ The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/),
 - Updated several software versions [#696](https://github.com/BU-ISCIII/buisciii-tools/pull/696)
 - Updated nextclade checks for IRMA and viralrecon [#697](https://github.com/BU-ISCIII/buisciii-tools/pull/697)
 - Enabled micromamba env activation when launching a script [#699](https://github.com/BU-ISCIII/buisciii-tools/pull/699)
+- Updated kaiju conf for taxprofiler [#701](https://github.com/BU-ISCIII/buisciii-tools/pull/701)
 
 ### Modules