Tests

primary-dx join #12

	name: Tests

	on:
	pull_request:
	workflow_call:

	jobs:
	pytest:
	name: Pytest
	runs-on: ubuntu-latest

	steps:
	- uses: actions/checkout@v4

	- uses: actions/setup-python@v5
	with:
	python-version: "3.12"

	- uses: astral-sh/setup-uv@v4

	- name: Install dependencies
	run: uv sync --extra dev --frozen

	- name: Run non-Postgres tests
	run: uv run pytest -m "not postgres" -v

	pytest-postgres:
	name: Pytest Postgres
	runs-on: ubuntu-latest

	services:
	postgres:
	image: postgres:16
	env:
	POSTGRES_DB: omop_constructs_ci
	POSTGRES_USER: omop_constructs
	POSTGRES_PASSWORD: omop_constructs
	ports:
	- 5432:5432
	options: >-
	--health-cmd "pg_isready -U omop_constructs -d omop_constructs_ci"
	--health-interval 10s
	--health-timeout 5s
	--health-retries 5

	env:
	ENGINE_CDM: postgresql+psycopg://omop_constructs:omop_constructs@127.0.0.1:5432/omop_constructs_ci
	ENGINE: postgresql+psycopg://omop_constructs:omop_constructs@127.0.0.1:5432/omop_constructs_ci

	steps:
	- uses: actions/checkout@v4

	- uses: actions/setup-python@v5
	with:
	python-version: "3.12"

	- uses: astral-sh/setup-uv@v4

	- name: Install dependencies
	run: uv sync --extra dev --frozen

	- name: Run Postgres tests
	run: uv run pytest -m postgres -v

Provide feedback