Curator extension #91
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| # This workflow is used to convert changed ark.model.csv to ark.model.jsonld | |
| # and push the updated ark.model.jsonld to feature branch | |
| name: ci-schema-convert | |
| on: | |
| pull_request: | |
| branches: [main] | |
| paths: | |
| - 'ark.all_attributes.csv' | |
| - '.github/workflows/ci-schema-convert.yml' | |
| - 'utils/**' | |
| - 'model_contexts/**' | |
| workflow_dispatch: | |
| env: | |
| CLIENT_VERSION: 4.11.0 | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| persist-credentials: false # otherwise, the token used is the GITHUB_TOKEN, instead of your personal access token. | |
| fetch-depth: 0 # otherwise, there would be errors pushing refs to the destination repository. | |
| # Set up supported python. | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version: '3.10.19' | |
| - name: Install Python Packages | |
| run: | | |
| pip install "synapseclient[pandas, curator]==${{ env.CLIENT_VERSION }}" | |
| pip show synapseclient | |
| - name: Create context-specific models | |
| run: | | |
| python utils/context_specific_models.py | |
| - name: Generate json schemas | |
| run: | | |
| python utils/generate_jsonschema.py | |
| - name: Generate blank CSV templates from json schema to support dictionary site build | |
| run: | | |
| python utils/generate_csv_templates.py | |
| - name: delete BDM-specific json schema files | |
| run: | | |
| rm model_json_schema/ark.BDM* | |
| - name: Commit files if there are changes | |
| run: | | |
| git status | |
| if [[ $(git status -z) ]]; then | |
| echo "Changes to model(s) identified and will be committed" | |
| git config --local user.name "$GITHUB_ACTOR" | |
| git config --local user.email "$GITHUB_ACTOR@users.noreply.github.com" | |
| git add -A | |
| git commit -m "GitHub Action: commit results of ci-schema-convert workflow" | |
| else | |
| echo "No changes to model(s) identified. Nothing to commit." | |
| fi | |
| - name: Push changes | |
| uses: ad-m/github-push-action@master | |
| with: | |
| github_token: ${{ secrets.GITHUB_TOKEN }} | |
| branch: ${{ github.event.pull_request.head.ref }} #The name of the branch being merged into main | |
| force: true |