midcine/pyproject.toml at main · 61465/midcine · GitHub

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[project]
name = "midcine"
version = "0.2.0"
description = "midcine RIS/PACS — Arabic cloud-native radiology suite"
requires-python = ">=3.12"

[tool.uv.workspace]
members = [
    "services/ingestion-api",
    "services/ai-worker",
    "services/ai-dispatcher",
    "services/ai-aggregator",
    "services/llm-service",
    "services/vision-ai",
    "services/fhir-gateway",
    "services/dicom-receiver",
    "services/cloud-index",
    "services/consent",
    "services/tunnel-broker",
    "apps/edge-pusher",
    "packages/shared-types/py",
    "packages/dicom-utils",
    "tests",
]

[tool.uv]
dev-dependencies = [
    "pytest>=8.3.0",
    "pytest-asyncio>=0.24.0",
    "pytest-cov>=6.0.0",
    "pytest-xdist>=3.6.0",
    "pytest-mock>=3.14.0",
    "pytest-rerunfailures>=14.0",
    "respx>=0.21.0",
    "httpx>=0.28.0",
    "testcontainers[postgres,redis]>=4.8.0",
    "factory-boy>=3.3.0",
    "fakeredis>=2.26.0",
    "ruff>=0.8.0",
    "mypy>=1.13.0",
    "bandit>=1.8.0",
]

[tool.ruff]
line-length = 100
target-version = "py312"
extend-exclude = [".venv", "alembic/versions"]

[tool.ruff.lint]
select = [
    "E",   # pycodestyle errors
    "F",   # pyflakes
    "I",   # isort
    "W",   # pycodestyle warnings
    "UP",  # pyupgrade
    "B",   # flake8-bugbear
    "SIM", # flake8-simplify
    "RUF", # ruff-specific
    "S",   # flake8-bandit (security)
    "A",   # flake8-builtins
    "C4",  # flake8-comprehensions
    "PT",  # flake8-pytest-style
    "RET", # flake8-return
    "TID", # flake8-tidy-imports
]
ignore = [
    "E501",  # line too long (formatter handles)
    "S101",  # assert (allowed in tests)
    "S104",  # hardcoded bind 0.0.0.0 (dev only)
]

[tool.ruff.lint.per-file-ignores]
"tests/**/*.py" = ["S", "PT"]
"**/migrations/**/*.py" = ["E", "F", "I"]

[tool.ruff.format]
quote-style = "double"
indent-style = "space"

[tool.mypy]
python_version = "3.12"
strict = true
warn_return_any = true
warn_unused_configs = true
disallow_untyped_defs = true
disallow_incomplete_defs = true
check_untyped_defs = true
no_implicit_optional = true
warn_redundant_casts = true
warn_unused_ignores = true
warn_no_return = true
warn_unreachable = true
exclude = ["alembic/versions/", "build/", "dist/"]

[[tool.mypy.overrides]]
module = ["tests.*"]
disallow_untyped_defs = false

[tool.pytest.ini_options]
asyncio_mode = "auto"
testpaths = ["tests", "services/*/tests"]
python_files = ["test_*.py", "*_test.py"]
addopts = [
    "-ra",
    "--strict-markers",
    "--strict-config",
    "--showlocals",
    "--tb=short",
]
markers = [
    "unit: unit tests (fast, no external deps)",
    "integration: integration tests (requires docker)",
    "e2e: end-to-end tests (full stack)",
    "slow: slow tests (skipped by default)",
]

[tool.coverage.run]
source = ["services", "packages"]
omit = ["*/tests/*", "*/migrations/*", "*/__pycache__/*"]
branch = true

[tool.coverage.report]
exclude_lines = [
    "pragma: no cover",
    "raise NotImplementedError",
    "if TYPE_CHECKING:",
    "if __name__ == .__main__.:",
]
show_missing = true
skip_covered = false